Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCTAGGGAGGATGTTTGTGCTCATCTGGGCCATGTGC
((((((((((((((((((.((.&))))))))))))).................)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145068
GeneSymbolTRPV3
Binding site1588,1627
Score0.949
Seed1
Au0.485
Energy-23.1
Binding len39
Me-3.938
Phylopstem0.08482221666666664
Phylopflank0.020158995
Longest consecutive pairings13
Position of longest consecutive pairings26
Pairings in 3prime end6
PositionCDS
2D Structure