Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGTTCTGCTAGGTC
((((((((.....(((((....&)))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145071
GeneSymbolCISH
Binding site1808,1826
Score0.923
Seed1
Au0.382
Energy-17.1
Binding len18
Me-13.697
Phylopstem0.67098145
Phylopflank1.8415483149999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure