Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCGCCAGGAGGGAGTGAA
...(.((((((((((((..((.&))..)))))))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145102
GeneSymbolZKSCAN5
Binding site4317,4336
Score1.0
Seed0
Au0.456
Energy-23.4
Binding len19
Me-10.634
Phylopstem-0.1454195
Phylopflank-0.021135525749999995
Longest consecutive pairings12
Position of longest consecutive pairings3
Pairings in 3prime end5
Position3UTR
2D Structure