Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGAGAAGGCTGTGAGTTTCAAGGCAAGCTGGATAGAAAGCAGGGA
...((((((((((((((((..&))).)))))))............................)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_145102
GeneSymbolZKSCAN5
Binding site1611,1657
Score1.0
Seed0
Au0.529
Energy-23.8
Binding len46
Me-6.515
Phylopstem0.49344680444444444
Phylopflank0.4018168449999999
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end6
PositionCDS
2D Structure