Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCGTTGGCATGCCAAGGTG
(((((((((.(((((((.....&)))))))..)))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145159
GeneSymbolJAG2
Binding site5096,5116
Score0.923
Seed1
Au0.397
Energy-19.6
Binding len20
Me-5.18
Phylopstem2.7164545999999996
Phylopflank1.8594120794999998
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end3
Position3UTR
2D Structure