Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCCATATTGCCTCTTATGGTATGTCAGGG
.((((((((((.(((.(((...&.)))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145168
GeneSymbolSDR42E1
Binding site339,368
Score1.0
Seed1
Au0.544
Energy-18.9
Binding len19
Me-7.373
Phylopstem-0.025738760000000006
Phylopflank-0.15223179874999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure