Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGTTTGAGGTTGTAGGGAGCTATGA
((.((((((((((((((((...&)))))))).............)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145174
GeneSymbolDNAJB7
Binding site1940,1972
Score0.846
Seed0
Au0.485
Energy-22.9
Binding len32
Me-5.495
Phylopstem0.7682903931034482
Phylopflank0.5817832687499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure