Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGAGGCCTCCATCCTCCCCTAGAGGGGTCAGG
..(((((((((((..(((..((&.))..)))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145203
GeneSymbolCSNK1A1L
Binding site341,376
Score1.0
Seed1
Au0.309
Energy-23.8
Binding len22
Me-6.549
Phylopstem2.2754427272727273
Phylopflank1.89218794625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure