Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCGTAAACAATGTAATGCCAGGA
.(((((((((((.(((......&.))).)))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145205
GeneSymbolHMGB4
Binding site2218,2245
Score0.923
Seed1
Au0.559
Energy-19.1
Binding len18
Me-5.082
Phylopstem-0.5205592833333332
Phylopflank0.64795835125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure