Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTAGGCCAGGCTAGTGA
((((((((....(((((((((.&)))))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145206
GeneSymbolVTI1A
Binding site2999,3020
Score0.923
Seed1
Au0.485
Energy-24.6
Binding len21
Me-12.408
Phylopstem-0.49403146666666664
Phylopflank-0.047376656249999996
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure