Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCATAATAAGAGTCTTCAGAGAGATGATGGGAGGGGCCAGTGA
((((((((((((((...((...&.))...)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145214
GeneSymbolTRIM11
Binding site2208,2252
Score1.0
Seed1
Au0.529
Energy-25.4
Binding len21
Me-4.906
Phylopstem0.7499757499999999
Phylopflank0.13411475125000008
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure