Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTAGGAATTGGAGACTAGC
..(((((((((((((((((...&)))))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145231
GeneSymbolEFCAB11
Binding site1259,1280
Score0.846
Seed1
Au0.456
Energy-21.2
Binding len21
Me-4.957
Phylopstem-0.40766974850000004
Phylopflank-0.07048902837500001
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure