Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGGGGCCCAGGATTGCAGGGGCCC
....((((((((((((((((((&)))))))))))............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145238
GeneSymbolZSCAN20
Binding site1542,1573
Score0.885
Seed0
Au0.412
Energy-26.6
Binding len31
Me-9.547
Phylopstem0.07369703666666666
Phylopflank0.06810963875000015
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure