Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTACATTGTATTCAGCTAGC
..((((((((((((((((((..&)))))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145261
GeneSymbolDNAJC19
Binding site1195,1217
Score0.923
Seed1
Au0.662
Energy-18.4
Binding len22
Me-4.957
Phylopstem3.969758380952381
Phylopflank3.7877647999999997
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure