Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGGAGGACAGGCCTAAAGACTGCAGTCTGGGGTGA
((((((((((((((((((....&)))))))))))...))).................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145262
GeneSymbolGLYCTK
Binding site2238,2277
Score0.923
Seed1
Au0.368
Energy-22.9
Binding len39
Me-3.938
Phylopstem-0.0629115263157895
Phylopflank-0.3806424312500001
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end4
Position3UTR
2D Structure