Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGCGACCGTGCTGCC
..(((((.((((((((..(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047423252
GeneSymbolRAPGEF1
Binding site14,33
Score0.923
Seed0
Au0.387
Energy-25.2
Binding len19
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure