Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGGACTCCTAGTAAGAATTGAATCTTGAGGGAGTA
.....(((((((((((((((((&)))))))))))........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145307
GeneSymbolRTKN2
Binding site3523,3565
Score0.923
Seed0
Au0.588
Energy-20.6
Binding len42
Me-13.666
Phylopstem1.136086082926829
Phylopflank0.9617166037499998
Longest consecutive pairings11
Position of longest consecutive pairings31
Pairings in 3prime end8
Position3UTR
2D Structure