Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCGCCTGGCTGGAGTGCAGTGG
((((((((((...((((((...&.))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145326
GeneSymbolZNF493
Binding site1048,1074
Score0.846
Seed1
Au0.456
Energy-21.4
Binding len21
Me-11.398
Phylopstem-0.05478336363636365
Phylopflank0.012782963000000036
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure