Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCTAGAGCACCACAGTTGGTGGGCCAGTT
.((((((((((..((((((...&.))).)))..)).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145341
GeneSymbolPDCD4
Binding site997,1028
Score0.923
Seed1
Au0.529
Energy-22.7
Binding len22
Me-8.429
Phylopstem5.872071290909091
Phylopflank4.283634790000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure