Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCAAAGAAAGGTGGTGCAGG
..(((((((((((((.(((((.&)))))..))))))).))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145341
GeneSymbolPDCD4
Binding site570,593
Score0.846
Seed1
Au0.441
Energy-21.5
Binding len23
Me-5.19
Phylopstem6.203739400000001
Phylopflank4.0570111337500006
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure