Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGGCAGGGGCCAGG
..(((((((((..(((((((..&))))))).))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145343
GeneSymbolAPOL1
Binding site1488,1506
Score0.974
Seed1
Au0.515
Energy-25.4
Binding len18
Me-9.593
Phylopstem-0.030345877777777776
Phylopflank-0.390122655
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure