Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCAGGCAGCTGATGCACAAGGCCTTGGACAGGGTG
..(((((((.((((.((((((&)))))).)))).))....................))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_145345
GeneSymbolUBXN11
Binding site1278,1318
Score0.846
Seed1
Au0.353
Energy-25.6
Binding len40
Me-6.935
Phylopstem0.6616099974074074
Phylopflank0.670819555375
Longest consecutive pairings6
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure