Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGCACAGGGAGGATGCACAGCCCGAGCATAGCGCCAGTGC
((((((((((((((((.((.((&)).)).)))))))))...................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145685
GeneSymbolBRF1
Binding site1938,1980
Score1.0
Seed1
Au0.338
Energy-23.4
Binding len42
Me-3.938
Phylopstem2.3691847600000004
Phylopflank2.2873546962499995
Longest consecutive pairings9
Position of longest consecutive pairings27
Pairings in 3prime end6
PositionCDS
2D Structure