Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGAAACAAGGATCAGCTGATCCGGGCAGCCGTGA
(((.(((((((((((((((...&))))))))....................))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145691
GeneSymbolATPAF2
Binding site512,552
Score0.974
Seed0
Au0.441
Energy-22.2
Binding len40
Me-6.97
Phylopstem2.176068270777778
Phylopflank1.7902082796250003
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure