Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTGTCAAAGTGACTCTGCTGGTGCCGGGC
.(((((((((((((((((....&)))))))))................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145702
GeneSymbolTIGD1
Binding site5651,5685
Score0.846
Seed1
Au0.456
Energy-20.4
Binding len34
Me-3.793
Phylopstem0.274198303030303
Phylopflank0.2089132624999999
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end4
Position3UTR
2D Structure