Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTACCCAGAAGGCACGGGGGGGAGATGCCAGCTGG
((((((((((((((((((((.(&).)))))))))))...........)).))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145702
GeneSymbolTIGD1
Binding site4346,4382
Score0.846
Seed1
Au0.397
Energy-24.8
Binding len36
Me-3.938
Phylopstem0.08420924242424237
Phylopflank0.28096853750000006
Longest consecutive pairings11
Position of longest consecutive pairings23
Pairings in 3prime end7
Position3UTR
2D Structure