Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACACTGGTTACTTTGGCTATAAGATGTGTGCCAGGG
.(((((((((((.(((((....&.)))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145725
GeneSymbolTRAF3
Binding site1716,1755
Score0.846
Seed1
Au0.471
Energy-23.9
Binding len21
Me-5.082
Phylopstem5.542569545454546
Phylopflank5.430131976249999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure