Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCGGCGGGAGGAGCCACGCGTGA
(((((((((((((((.((((..&)))).).)))))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145725
GeneSymbolTRAF3
Binding site2221,2246
Score1.0
Seed1
Au0.412
Energy-26.4
Binding len25
Me-4.171
Phylopstem1.545411810526316
Phylopflank1.52889248
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure