Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&GTGGACCCACATCCTACAGCCAGAGGTGATGTTGG
((.(((((((((((((.....&.))))))))))))).)).
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_145726
GeneSymbolTRAF3
Binding site6107,6142
Score0.846
Seed0
Au0.441
Energy-17.7
Binding len18
Me-5.495
Phylopstem-0.6227341615384615
Phylopflank-0.60668631125
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure