Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCCCTTCTGCGTTGTTATGCCAC
...((((((((((((((((...&.)))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145759
GeneSymbolTRAF5
Binding site3284,3309
Score1.0
Seed0
Au0.456
Energy-21.9
Binding len19
Me-6.515
Phylopstem-0.3647501294117647
Phylopflank-0.18201602199999994
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure