Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGTAATGAGAGATGACATTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGC
..((((((((((((((((....&.))))))))))................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145803
GeneSymbolTRAF6
Binding site3251,3312
Score0.923
Seed1
Au0.5
Energy-25.6
Binding len34
Me-4.957
Phylopstem-0.3671122031250001
Phylopflank-0.07475063750000004
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end4
Position3UTR
2D Structure