Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145803
GeneSymbolTRAF6
Binding site4677,4698
Score0.846
Seed1
Au0.382
Energy-24.2
Binding len21
Me-10.109
Phylopstem-0.04346987272727273
Phylopflank-0.06662605124999998
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure