Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTCACTGTGCCAGGC
.(((((((((...((((((...&)))).)).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145811
GeneSymbolCACNG5
Binding site3466,3484
Score0.808
Seed1
Au0.544
Energy-18.4
Binding len18
Me-11.254
Phylopstem0.20490864444444445
Phylopflank-0.02886704749999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure