Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGCTCACTGCCAGGTG
((((((((.....(.((((...&)))).).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_145887
GeneSymbolPIDD1
Binding site1434,1454
Score0.846
Seed1
Au0.368
Energy-17.0
Binding len20
Me-14.433
Phylopstem3.33196125
Phylopflank2.7916602715625007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure