Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGC
(((((((((((((((((.....&.))))))))))........)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145892
GeneSymbolRBFOX1
Binding site884,945
Score0.846
Seed1
Au0.485
Energy-20.1
Binding len28
Me-3.938
Phylopstem5.006724807692309
Phylopflank4.8010059174999995
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end3
PositionCDS
2D Structure