Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTGAGAAGCGGGGCCGGG
..(((((((((((((.(((...&))).))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145901
GeneSymbolHMGA1
Binding site549,568
Score0.955
Seed1
Au0.309
Energy-24.1
Binding len19
Me-5.19
Phylopstem3.488263371428571
Phylopflank2.6007093125000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure