Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGCGGCGGAGCCAGG
..((((((((...((((((...&))).))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145901
GeneSymbolHMGA1
Binding site354,371
Score0.846
Seed1
Au0.235
Energy-22.9
Binding len17
Me-12.418
Phylopstem1.360312875
Phylopflank0.9020971687499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure