Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCTAGGATGCTGCAGCAGAGTGAGCAAGGGGGCCCAAATCGACCATAAAGGGTGT
(((((((((((((((((((((.&)))))).....................)).)))))))))................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_145903
GeneSymbolHMGA1
Binding site1592,1652
Score0.923
Seed1
Au0.412
Energy-22.0
Binding len60
Me-3.938
Phylopstem1.2857446081355928
Phylopflank0.9119051575000001
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure