Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAGAGGGAGCCCCCGGTATACCAAGGGAGCCAGTT
.(((((((((((((((((....&.)))))......)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_147157
GeneSymbolSIGMAR1
Binding site905,944
Score1.0
Seed1
Au0.441
Energy-26.7
Binding len25
Me-3.793
Phylopstem1.8718445934782608
Phylopflank2.0098164481249996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure