Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGGGGAGGATGCCAGC
..(((((((((((((((((...&)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_147161
GeneSymbolACOT11
Binding site2176,2197
Score0.846
Seed1
Au0.324
Energy-25.8
Binding len21
Me-4.957
Phylopstem1.36518259
Phylopflank0.06997689374999999
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure