Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCTCAGGCTTCTGCCTCTGGCGCGAGGGGGACCAGCTGA
((((((((((((((((((((((&))))))))).................))))))).)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_147161
GeneSymbolACOT11
Binding site1664,1706
Score0.923
Seed1
Au0.368
Energy-24.8
Binding len42
Me-3.938
Phylopstem3.2946012926829282
Phylopflank2.6620904999999997
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure