Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGCCAGCAAGGCCAGGGATGGCCGGAGGGCTGCGGGCTCC
.((.(((((((((((((..((&.))..))))))))))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_147161
GeneSymbolACOT11
Binding site2492,2533
Score1.0
Seed0
Au0.338
Energy-29.6
Binding len22
Me-6.825
Phylopstem1.1173876230769233
Phylopflank1.07792909125
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure