Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGAAGAAGGGCCCGTGG
(((.(((((((((((((((((.&))))))))))))..))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_147223
GeneSymbolNCOA1
Binding site5383,5407
Score0.897
Seed0
Au0.338
Energy-31.8
Binding len24
Me-6.97
Phylopstem0.7722735210526315
Phylopflank0.8248890387500001
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure