Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTGCATTGCTGGTCAGGA
.((((((...(((((((((((.&)))))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_147783
GeneSymbolCTSB
Binding site2772,2793
Score0.904
Seed1
Au0.559
Energy-20.4
Binding len21
Me-8.406
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure