Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAAACAAGGAGCCT
....((((((((..((((((((&))))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_148672
GeneSymbolCCL28
Binding site2114,2134
Score1.0
Seed0
Au0.544
Energy-24.5
Binding len20
Me-11.693
Phylopstem0.16053545
Phylopflank0.27886776375
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure