Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATCCAGAAAGGTAGTGA
(((((...(((((((((((((.&)))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_148674
GeneSymbolSMC1B
Binding site2553,2572
Score1.0
Seed0
Au0.647
Energy-25.2
Binding len19
Me-9.696
Phylopstem3.641055076923077
Phylopflank4.184255294
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure