Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGACCTTCCGGATGGGGGCCAC
...((((((((.((((((....&.)))))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_148918
GeneSymbolSHMT1
Binding site618,642
Score0.923
Seed0
Au0.382
Energy-23.1
Binding len17
Me-9.861
Phylopstem-0.258396225
Phylopflank-0.2241595675
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure