Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCAGGGGAAGGGCCAGTGG
(((((((.(((((((.(((...&)))..)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_148955
GeneSymbolSNX1
Binding site2797,2817
Score0.846
Seed1
Au0.5
Energy-26.9
Binding len20
Me-6.484
Phylopstem-0.5780069571428571
Phylopflank-0.25670921
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure