Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTG
(((((((((((((((((((..&)))))))))))..................)))).).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_148955
GeneSymbolSNX1
Binding site4576,4616
Score0.846
Seed1
Au0.397
Energy-25.0
Binding len40
Me-3.938
Phylopstem0.0031174871794871586
Phylopflank-0.11337673750000003
Longest consecutive pairings11
Position of longest consecutive pairings29
Pairings in 3prime end6
Position3UTR
2D Structure