Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGGAAACTGTGTTCCCTGCAACCAGTGTGGGCCAGGC
.((((((.((((.(((((....&.))))).....)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_148957
GeneSymbolTNFRSF19
Binding site595,636
Score0.846
Seed1
Au0.456
Energy-18.7
Binding len23
Me-7.396
Phylopstem1.6049235
Phylopflank3.716557921249999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure